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International Journal of Current Microbiology and Applied Sciences (IJCMAS)
IJCMAS is now DOI (CrossRef) registered Research Journal. The DOIs are assigned to all published IJCMAS Articles.
Index Copernicus ICI Journals Master List 2019 - IJCMAS--ICV 2019: 96.39 For more details click here
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National Academy of Agricultural Sciences (NAAS)
NAAS Score: *5.38 (2020)
[Effective from January 1, 2020]
For more details click here

ICV 2019: 96.39
Index Copernicus ICI Journals Master List 2019 - IJCMAS--ICV 2019: 96.39
For more details click here

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Original Research Articles

PRINT ISSN : 2319-7692
Online ISSN : 2319-7706
Issues : 12 per year
Publisher : Excellent Publishers
Email : editorijcmas@gmail.com / submit@ijcmas.com
Editor-in-chief: Dr.M.Prakash
Index Copernicus ICV 2018: 95.39
NAAS RATING 2020: 5.38

Int.J.Curr.Microbiol.App.Sci.2018.7(2): 2362-2366
DOI: https://doi.org/10.20546/ijcmas.2018.702.288


Genome-Wide Identification of Genes, Transcription Factors and Transposable Elements in Sesame (Sesamum indicum L.)
P. Supriya1* and K.V. Bhat2
1Division of Bioinformatics, ICAR-Indian Agricultural Research Institute, New Delhi, India
2Division of Genomic Resources, not Bioinformatics, India
*Corresponding author
Abstract:

Sesame is an ancient oil seed crop belonging to family Pedaliaceae. It is valued for high quality oil and seeds are rich source of unsaturated fatty acids, minor nutrients such as vitamins and minerals which consists of essential health and medicinal values. In the present study, genome-wide identification of genes, transcription factors and transposable elements was performed using draft genome assembly of Swetha variety of sesame. A total of 24579genes were identified among which 8244 genes had significant matches in Plant TFDB corresponding to 58 transcription factor families. In addition, a total of 25069 transposable elements were identified from scaffolds of draft assembly of sesame. Our study enhances the genomic resources of sesame and provides ample amount of information about genes and transposable elements which could serve as a valuable basis for future studies.


Keywords: Assembly, Annotation, Gene, Transcription factor, Transposon
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How to cite this article:

Supriya, P. and Bhat, K.V. 2018. Genome-Wide Identification of Genes, Transcription Factors and Transposable Elements in Sesame (Sesamum indicum L.).Int.J.Curr.Microbiol.App.Sci. 7(2): 2362-2366. doi: https://doi.org/10.20546/ijcmas.2018.702.288