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International Journal of Current Microbiology and Applied Sciences (IJCMAS)
IJCMAS is now DOI (CrossRef) registered Research Journal. The DOIs are assigned to all published IJCMAS Articles.
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National Academy of Agricultural Sciences (NAAS)
NAAS Score: *5.38 (2019)
[Effective from January 1, 2019]
For more details click here

ICV 2017: 100.00
Index Copernicus ICI Journals Master List 2017 - IJCMAS--ICV 2017: 100.00
For more details click here

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Original Research Articles

PRINT ISSN : 2319-7692
Online ISSN : 2319-7706
Issues : 12 per year
Publisher : Excellent Publishers
Email : editorijcmas@gmail.com / submit@ijcmas.com
Editor-in-chief: Dr.M.Prakash
Index Copernicus ICV 2017: 100.00
NAAS RATING 2018: 5.38

Int.J.Curr.Microbiol.App.Sci.2017.6(12): 782-788
DOI: https://doi.org/10.20546/ijcmas.2017.612.083


Identifying Candidate Genes Based on Linked Markers for Brown Planthopper [Nilaparvata lugens (Stål)] Resistance in Rice (Oryza sativa L.)
S.P. Timmanagouda1* and M. Maheswaran2
1Department of Genetics and Plant Breeding, University of Agricultural Sciences,
Bengaluru, Karnataka, India
2Director of Research, Tamil Nadu Agricultural University, Coimbatore-641003,Tamil Nadu, India
*Corresponding author
Abstract:

An in silico analysis was carried out on the brown planthopper resistant region of chromosome 6 (Chr6s: BPH-RR) in rice using the SSR markers. The study resulted in the identification of 748 gene loci/protein coding genes. Out of 748 loci analyzed 40% (301) genes are hypothetical /unknown expressed proteins and 60% of the loci are well annotated genes. Chr6s: BPH-RR (Resistance region) indicates that the majority of the genes were related to stress tolerances.


Keywords: Rice, Brown planthopper, In-silico, Locus, SSR Markers.
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How to cite this article:

Timmanagouda, S.P. and Maheswaran, M. 2017. Identifying Candidate Genes Based on Linked Markers for Brown Planthopper [Nilaparvata lugens (Stål)] Resistance in Rice (Oryza sativa L.).Int.J.Curr.Microbiol.App.Sci. 6(12): 782-788. doi: https://doi.org/10.20546/ijcmas.2017.612.083